Fitness data for PP_3160 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -2.1 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.5 -1.8 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.5 -1.8 compare
phage P. putida Missley MOI 0.1 -0.4 -1.3 compare
carbon source carbon source Bisabolene 48.9 mM -0.4 -1.8 compare
stress R2A with Fusaric 120 ug/mL -0.4 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.4 compare
nitrogen source Hippuric (N) -0.4 -2.3 compare
lb outgrowth control LB outgrowth control -0.4 -2.6 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.4 +1.6 compare
carbon source L-Glutamic (C) +0.4 +2.9 compare
pH pH 6 +0.4 +1.5 compare
temperature Growth at 30C; with MOPS +0.4 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +1.9 compare
carbon source Vanillic Acid (C) +0.4 +2.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.6 compare
carbon source propionate (C) +0.5 +3.6 compare
carbon source Trisodium citrate (C) +0.5 +1.9 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +2.0 compare
phage P. putida Sci small MOI 0.1 +0.8 +2.7 compare