Fitness data for PP_3159 in Pseudomonas putida KT2440

BenABC operon transcriptional activator
SEED: benABC operon transcriptional activator BenR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source benzoic (C) -3.2 -8.7 compare
carbon source benzoic (C) -3.0 -10.4 compare
nitrogen source Hippuric (N) -0.8 -4.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.7 -2.7 compare
nitrogen source Hippuric (N) -0.7 -3.2 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.7 compare
carbon source benzoic (C) -0.7 -3.7 compare
pH Growth at pH7 and (C) Trisodium citrate -0.6 -1.6 compare
carbon source ferulate (C); with MOPS -0.6 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.7 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.5 -2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.4 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.6 compare
phage P. putida South MOI 10 -0.5 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -3.2 compare
stress Growth with Chloride 500 mM; with MOPS +0.5 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.8 +3.0 compare