Fitness data for PP_3154 in Pseudomonas putida KT2440

lipid A 3-O-deacylase
SEED: Lipid A 3-O-deacylase
KEGG: lipid A 3-O-deacylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 2,3-Butanediol (C) -1.8 -8.8 compare
carbon source Decanoic (C) -1.2 -6.9 compare
nitrogen source Ammonium chloride and TNT (N) -0.9 -4.7 compare
nitrogen source Ammonium chloride and TNT (N) -0.8 -6.1 compare
nitrogen source Ammonium chloride and TNT (N) -0.8 -4.9 compare
carbon source Delta-Nonalactone (C) -0.7 -4.2 compare
nitrogen source Ammonium chloride and TNT (N) -0.6 -4.4 compare
stress Formaldehyde 0.03125 vol% -0.6 -4.2 compare
carbon source Delta-Decalactone (C) -0.5 -3.2 compare
carbon source Nonanoic (C) -0.5 -2.9 compare
phage P. putida PUT 7 MOI 1 -0.5 -1.6 compare
carbon source ferulate (C); with MOPS -0.5 -2.4 compare
carbon source D-Glucose (C) 10 mM -0.5 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -2.3 compare
stress R2A with Fusaric 240 ug/mL -0.4 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.5 compare
carbon source Valeric (C) -0.4 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +2.1 compare
pH Growth at pH8 and (C) Trisodium citrate +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.1 compare