Fitness data for PP_3149 in Pseudomonas putida KT2440

Transcriptional regulator, AraC family
SEED: Ethanolamine operon regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source spermidine (N) -1.5 -5.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.1 -2.2 compare
nitrogen source spermidine (N) -1.0 -4.0 compare
phage P. putida Sci small MOI 0.1 -0.9 -1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.3 compare
carbon source L-Leucine (C) -0.6 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -3.2 compare
stress R2A with Fusaric 240 ug/mL -0.5 -1.8 compare
pH D-Glucose (C) pH 6.5 -0.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -1.9 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.5 -2.0 compare
stress R2A with Fusaric 240 ug/mL +0.5 +2.1 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.5 +2.3 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +1.8 compare
temperature shift Temperature shift 30_to_25 +0.6 +1.8 compare
pH pH 9 +0.6 +1.6 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.6 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.1 compare