Fitness data for PP_3145 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Putative outer membrane lipoprotein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -2.2 -2.5 compare
pH Growth at pH7 and (C) Trisodium citrate -1.0 -4.1 compare
carbon source L-Phenylalanine 5 mM (C) -0.8 -3.1 compare
carbon source D-Glucose (C) -0.8 -1.8 compare
temperature shift Temperature shift 30_to_25 -0.7 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.8 compare
temperature shift Temperature shift 30_to_25 -0.7 -2.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.4 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.6 -1.8 compare
carbon source 2-Methylbutanoic (C) -0.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.6 -1.9 compare
nitrogen source Ammonium chloride and TNT (N) -0.6 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.6 compare
pH Growth at pH8 and (C) D-Glucose +0.6 +3.3 compare
carbon source 4-Aminobutyric 10 mM (C) +0.6 +1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.3 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.7 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.3 compare