Fitness data for PP_3119 in Pseudomonas putida KT2440

error-prone DNA polymerase
SEED: Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7)
KEGG: error-prone DNA polymerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -0.6 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -2.3 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.4 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.3 -1.7 compare
nitrogen source nitrogen source nitrate 5mM -0.3 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3 -1.5 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.3 -1.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.3 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -2.0 compare
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.3 -1.6 compare
pH Growth at pH6 and (C) Trisodium citrate -0.3 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3 -1.8 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.3 +1.5 compare
nitrogen source Urea (N) +0.3 +1.6 compare
nitrogen source Ammonium chloride and TNT (N) +0.3 +2.0 compare
nitrogen source TNT (N) +0.3 +2.1 compare
carbon source ferulate (C); with MOPS +0.4 +2.2 compare