Fitness data for PP_3097 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Protein ImpG/VasA
KEGG: type VI secretion system protein ImpG

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -0.8 -1.6 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -2.1 compare
phage P. putida PUT 7 MOI 1 -0.6 -1.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.5 -2.2 compare
carbon source L-Leucine (C) -0.5 -1.7 compare
carbon source Sebacic (C) -0.5 -2.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.4 -1.7 compare
nitrogen source NAG (N); with MOPS -0.4 -1.8 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.0 compare
stress 3-methyl-1-butanol 0.4 vol% +0.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.2 compare
stress Isobutyl alcohol 0.6 vol% +0.5 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.9 compare
carbon source D-Mannose (C) +0.5 +3.3 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.5 +1.7 compare
nitrogen source nitrogen source nitrite 0.5mM +0.5 +1.9 compare
nitrogen source nitrogen source nitrite 1mM +0.5 +1.7 compare
stress 1-Pentanol 0.3 vol% +0.8 +5.3 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +1.0 +3.6 compare