Fitness data for PP_3096 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Uncharacterized protein ImpH/VasB
KEGG: type VI secretion system protein ImpH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -1.5 -3.9 compare
phage P. putida Sci small MOI 0.1 -1.1 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -4.0 compare
phage P. putida PUT 7 MOI 1 -0.6 -2.2 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.5 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.7 compare
nitrogen source nitrogen source nitrite 1mM -0.5 -1.7 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.4 compare
nitrogen source nitrate (N) -0.5 -2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.6 compare
stress R2A with Fusaric 240 ug/mL +0.4 +2.5 compare
temperature shift Temperature shift 30_to_4; with MOPS +0.5 +2.4 compare
stress 3-methyl-1-butanol 0.4 vol% +0.5 +2.3 compare
carbon source D-Fructose (C) +0.5 +3.3 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.5 +2.1 compare
stress 1-Pentanol 0.3 vol% +0.5 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.6 compare