Fitness data for PP_3094 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Probable lipoprotein
KEGG: type VI secretion system protein VasD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -5.7 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -2.3 -1.6 compare
nitrogen source Urea (N); with MOPS -1.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -2.2 compare
phage PUT 8 MOI 1 -1.3 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.3 -1.1 compare
temperature Growth at 25C; with MOPS -1.3 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -2.3 compare
carbon source D-Glucose (C); with MOPS -1.2 -2.1 compare
stress Growth with Chloride 200 mM -1.2 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.5 compare
carbon source Trisodium citrate (C) -1.1 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.1 -2.1 compare
nitrogen source Ammonium chloride (N) -1.1 -1.4 compare
pH Growth at pH7 and (C) D-Glucose -1.0 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.0 -1.2 compare
carbon source Valerolactone (C) -1.0 -1.7 compare
nitrogen source nitrogen source nitrite 1mM +1.0 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.8 compare