Fitness data for PP_3077 in Pseudomonas putida KT2440

putative ABC transporter permease protein
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
KEGG: microcin C transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -2.1 compare
carbon source D-Glucose (C); with MOPS -0.9 -2.3 compare
temperature Growth at 30C -0.9 -3.3 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -1.8 compare
pH D-Glucose (C) pH 6.5 -0.8 -2.8 compare
pH Valerolactone (C) pH 6.5 -0.8 -1.8 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.7 -3.8 compare
stress Growth with Chloride 200 mM; with MOPS -0.7 -2.3 compare
nitrogen source nitrogen source nitrite 0.5mM -0.7 -1.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.7 -1.4 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -1.8 compare
pH Growth at pH9 and (C) D-Glucose -0.6 -2.1 compare
stress R2A with Fusaric 240 ug/mL -0.6 -2.7 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.3 compare
temperature shift Temperature shift 10_to_30 -0.6 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.6 +1.7 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +1.8 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +2.2 compare