Fitness data for PP_3075 in Pseudomonas putida KT2440

putative transcriptional regulator
SEED: sigma-54 dependent transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source DL-3-Hydroxybutyric (C) -4.9 -3.4 compare
carbon source DL-3-Hydroxybutyric (C) -3.7 -4.4 compare
carbon source 1,3-Butandiol (C) -2.1 -7.0 compare
carbon source 1,4-Butanediol (C) -2.1 -5.8 compare
nitrogen source Propiolactam (N) -2.0 -2.4 compare
carbon source 1,4-Butanediol (C) -2.0 -4.4 compare
carbon source 1,3-Butandiol (C) -1.5 -5.2 compare
carbon source 1,3-Butandiol (C) -1.5 -2.0 compare
nitrogen source nitrate (N) -1.3 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -2.6 compare
nitrogen source nitrate (N) -1.1 -1.6 compare
carbon source Nonanoic (C) -1.0 -1.5 compare
phage P. putida Sci small MOI 0.1 -1.0 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -3.0 compare
stress R2A with Fusaric 240 ug/mL -0.9 -1.4 compare
no stress control Growth with no stress -0.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9 -1.6 compare
nitrogen source Ammonium chloride (N) +0.9 +2.5 compare
pH pH 8 +1.0 +1.8 compare
pH pH 6 +1.0 +1.8 compare