Fitness data for PP_3067 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.7 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.5 -2.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.5 -1.7 compare
carbon source L-Leucine (C) -0.5 -1.5 compare
carbon source acetate (C) +0.5 +2.0 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +2.2 compare
phage PUT8 MOI 10 +0.5 +2.8 compare
nitrogen source Urea (N) +0.5 +2.2 compare
carbon source 3-Hydroxydecanoic (C) +0.5 +2.2 compare
phage PUT 8 MOI 1 +0.6 +1.9 compare
phage PUT8 MOI 10 +0.6 +2.9 compare
phage PUT8 MOI 0.1 +0.6 +2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +2.9 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.6 compare
nitrogen source nitrogen source nitrite 1mM +0.6 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.5 compare
phage PUT8 MOI 0.1 +0.9 +4.3 compare
phage P. putida Sci small MOI 0.1 +1.2 +5.3 compare