Fitness data for PP_3063 in Pseudomonas putida KT2440

Pyocin R2_PP, tail formation protein
SEED: Phage protein U

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -1.4 -3.1 compare
phage P. putida Sci Big MOI 0.1 -0.9 -1.8 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.9 -2.9 compare
nitrogen source nitrogen source nitrite 1mM -0.9 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.9 -1.7 compare
phage P. putida Missley MOI 0.1 -0.9 -1.5 compare
pH Growth at pH6 and (C) Trisodium citrate -0.8 -2.8 compare
nitrogen source nitrogen source nitrite 0.5mM -0.8 -2.3 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.8 -1.2 compare
pH Growth at pH7 and (C) Trisodium citrate -0.8 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.8 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.5 compare
carbon source ferulate (C); with MOPS -0.7 -1.1 compare
carbon source D-Glucose (C) -0.7 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -1.7 compare
carbon source Vanillin (C) -0.7 -2.3 compare
carbon source carbon source Bisabolene 48.9 mM -0.7 -1.9 compare
carbon source D-Glucose (C) +0.7 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.7 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +2.8 compare