Fitness data for PP_3060 in Pseudomonas putida KT2440

putative tail sheath protein
SEED: Phage major tail tube protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -1.3 -3.5 compare
phage P. putida Sci Big MOI 0.1 -1.0 -1.6 compare
carbon source Myristic (C) -0.8 -2.2 compare
nitrogen source Propiolactam (N) -0.7 -2.6 compare
nitrogen source nitrogen source nitrite 0.5mM -0.7 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -2.3 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.7 -1.9 compare
pH pH 7 -0.7 -2.2 compare
carbon source carbon source Glycerol 108.6 mM -0.6 -2.8 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.6 -2.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.6 -2.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.6 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.6 -2.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.4 compare
nitrogen source Hydantoin (N) -0.6 -2.8 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.6 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare
no stress control Growth with no stress +0.6 +1.7 compare
phage P. putida Sci small MOI 0.1 +0.6 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.0 compare