Fitness data for PP_3055 in Pseudomonas putida KT2440

Pyocin R2_PP, tail formation protein
SEED: FIG00953630: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.8 -2.7 compare
nitrogen source NAG (N); with MOPS -1.6 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.5 -3.1 compare
phage PUT 8 MOI 1 -1.2 -2.1 compare
nitrogen source Urea (N) -1.1 -1.8 compare
phage moi 100 Time6-phageFRS -1.1 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -2.0 compare
nitrogen source nitrate (N) -0.9 -1.7 compare
pH Growth at pH6 and (C) Trisodium citrate -0.9 -1.4 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.9 -2.3 compare
pH pH 5 -0.9 -1.8 compare
temperature shift Temperature shift 30_to_10 -0.9 -2.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.8 -2.7 compare
carbon source L-tyrosine 5 mM (C) -0.8 -1.8 compare
carbon source carbon source Bisabolol 45 mM -0.8 -2.5 compare
stress MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL -0.8 -1.5 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.8 -2.6 compare
pH Valerolactone (C) pH 6.5 +0.9 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +1.9 compare