Fitness data for PP_3054 in Pseudomonas putida KT2440

Pyocin R2_PP, baseplate/tail fiber protein
SEED: Baseplate assembly protein J

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -1.0 -3.0 compare
r2a control R2A control -0.9 -2.5 compare
carbon source 4-Aminobutyric 10 mM (C) -0.8 -1.7 compare
nitrogen source nitrogen source nitrite 1mM -0.8 -2.2 compare
phage P. putida Sci Big MOI 0.1 -0.7 -1.7 compare
carbon source 3-Hydroxydecanoic (C) -0.7 -2.1 compare
carbon source 5-Aminovaleric 10 mM (C) -0.7 -2.5 compare
phage P. putida Missley MOI 0.1 -0.7 -1.1 compare
stress R2A with Fusaric 480 ug/mL -0.6 -2.0 compare
carbon source Trisodium citrate 10 mM (C) -0.6 -2.8 compare
carbon source Valerolactone (C) -0.6 -1.7 compare
pH Growth at pH7 and (C) Trisodium citrate -0.6 -1.6 compare
carbon source carbon source D-Glucose 55.5 mM +0.6 +1.3 compare
pH pH 8 +0.6 +1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.7 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 +2.3 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.7 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.8 +2.0 compare
pH pH 6 +0.9 +2.0 compare