Fitness data for PP_3040 in Pseudomonas putida KT2440

Pyocin R2_PP, holin
SEED: Holin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source Urea (N) -1.9 -1.8 compare
pH pH 6 -1.4 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.3 -2.5 compare
no stress control Growth with no stress -1.2 -1.4 compare
phage P. putida Sci small MOI 0.1 -1.2 -0.8 compare
carbon source carbon source Bisabolene 48.9 mM -1.2 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0 -1.4 compare
nitrogen source nitrate (N) -1.0 -1.6 compare
carbon source carbon source 4-vinylphenol 0.1 mM -1.0 -1.0 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.9 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -2.5 compare
stress Growth with Chloride 200 mM; with MOPS -0.8 -2.1 compare
nitrogen source Propandiamine (N) +0.8 +3.2 compare
temperature Growth at 30C +0.8 +3.6 compare
temperature shift Temperature shift 30_to_34 +0.9 +4.0 compare
phage P. put South MOI 10 +1.0 +3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +3.9 compare
phage P. putida Sci Big MOI 0.1 +1.2 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +1.1 compare