Fitness data for PP_3001 in Pseudomonas putida KT2440

CAIB/BAIF family protein
SEED: CAIB/BAIF family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.0 compare
carbon source ferulate (C); with MOPS -0.7 -1.8 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -2.5 compare
temperature Growth at 34C -0.5 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.6 compare
temperature Growth at 25C; with MOPS -0.5 -1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.2 compare
nitrogen source L-Valine (N) -0.5 -3.2 compare
nitrogen source Propiolactam (N) -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.7 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.5 +1.2 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5 +1.5 compare
pH pH 9 +0.5 +1.2 compare
nitrogen source Urea (N) +0.5 +2.1 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5 +1.5 compare
phage P. putida Missley MOI 0.1 +0.5 +1.4 compare
pH pH 8 +0.6 +1.6 compare
phage P. putida Sci small MOI 0.1 +0.6 +1.8 compare