Fitness data for PP_2988 in Pseudomonas putida KT2440

Alcohol dehydrogenase, zinc-containing
SEED: Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
pH Growth at pH7 and (C) Trisodium citrate -0.8 -2.3 compare
phage P. putida Sci Big MOI 0.1 -0.8 -2.2 compare
pH Growth at pH9 and (C) Trisodium citrate -0.8 -2.8 compare
carbon source 5-Aminovaleric 10 mM (C) -0.6 -3.0 compare
pH Growth at pH8 and (C) Trisodium citrate -0.6 -3.0 compare
microaerobic m9 microaerobic M9 -0.6 -3.1 compare
phage PUT8 MOI 0.1 -0.6 -2.3 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.4 compare
no stress control Growth with no stress -0.5 -2.4 compare
carbon source 3-Hydroxydecanoic (C) -0.5 -2.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.5 -1.9 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.5 -3.0 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -2.0 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.5 -2.6 compare
phage P. putida PUT 7 MOI 1 -0.5 -1.5 compare
pH Growth at pH9 and (C) D-Glucose -0.5 -2.5 compare
pH Valerolactone (C) pH 6.5 -0.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.6 compare
temperature shift Temperature shift 10_to_21; with MOPS -0.5 -2.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +2.1 compare