Fitness data for PP_2972 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
phage PUT 8 MOI 1 -6.8 -2.4 compare
pH Growth at pH7 and (C) D-Glucose -6.6 -2.3 compare
pH Growth at pH7 and (C) Trisodium citrate -3.9 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.3 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.2 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.0 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.8 -2.2 compare
phage P. putida PUT10 MOI 1 -1.6 -2.2 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -1.6 -1.9 compare
carbon source 1,3-Butandiol (C) -1.6 -0.9 compare
pH Growth at pH7 and (C) D-Glucose -1.5 -1.0 compare
nitrogen source no extra (N); with MOPS -1.4 -1.5 compare
temperature shift Temperature shift 30_to_34; with MOPS -1.4 -1.0 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.4 -1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.4 -1.1 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +1.4 +2.9 compare
temperature shift Temperature shift 30_to_25; with MOPS +1.4 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +1.4 +2.2 compare
carbon source carbon source D-Glucose 55.5 mM +1.6 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.5 +2.5 compare