Fitness data for PP_2960 in Pseudomonas putida KT2440

transcriptional regulator, AraC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -1.8 -2.4 compare
nitrogen source nitrogen source nitrate 20mM -1.6 -4.4 compare
carbon source Tween 20 (C) -1.4 -2.2 compare
temperature shift Temperature shift 10_to_34; with MOPS -1.3 -3.2 compare
pH Growth at pH7 and (C) D-Glucose -1.1 -1.4 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.0 -2.3 compare
toxin pUC18_phdP1_pSU18T_docP1 -1.0 -2.4 compare
nitrogen source no extra (N); with MOPS -1.0 -1.4 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -0.9 -2.3 compare
micoeukaryotes C.elegans, mixed culture-2 -0.8 -1.9 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.8 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.8 +3.0 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.8 +1.9 compare
pH D-Glucose (C) pH 6 +0.8 +2.6 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.9 +2.4 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.9 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +4.5 compare
carbon source Glucose (C) (40mM) +1.1 +3.7 compare
carbon source Glucose (C) (20mM) +1.2 +4.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.8 +1.6 compare