Fitness data for PP_2953 in Pseudomonas putida KT2440

Alcohol dehydrogenase, zinc-containing
SEED: Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.9 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.6 compare
nitrogen source Ammonium chloride and TNT (N) -0.6 -3.1 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.6 compare
phage PUT8 MOI 0.1 -0.5 -2.8 compare
carbon source Levulinic Acid (C) -0.5 -2.5 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -1.6 compare
carbon source D-Glucose (C); with MOPS -0.5 -1.6 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -1.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4 -1.8 compare
pH Growth at pH7 and (C) Trisodium citrate -0.4 -1.3 compare
carbon source ferulate (C); with MOPS +0.5 +1.7 compare
carbon source Heptanoic (C) +0.5 +2.4 compare
stress Growth with Chloride 500 mM; with MOPS +0.5 +2.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.6 compare
carbon source 1,3-Butandiol (C) +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare
pH pH 9 +0.7 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.1 compare