Fitness data for PP_2931 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: YheO-like PAS domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
phage P. putida South MOI 0.1 -1.6 -2.7 compare
pH Growth at pH6 and (C) D-Glucose -1.5 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -1.3 -1.6 compare
pH pH 5 -1.3 -2.3 compare
pH pH 9 -1.3 -2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -1.2 -2.4 compare
pH Growth at pH7 and (C) Trisodium citrate -1.2 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.2 -2.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.1 -1.0 compare
nitrogen source nitrate (N) -1.0 -1.7 compare
nitrogen source 2,6-diaminopimelic (N) -1.0 -2.1 compare
pH pH 4 -1.0 -2.7 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.0 -2.8 compare
temperature shift Temperature shift 30_to_34; with MOPS -1.0 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -0.9 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.0 +2.5 compare
nitrogen source Ammonium chloride and TNT (N) +1.1 +3.3 compare
nitrogen source TNT (N) +1.1 +3.7 compare