Fitness data for PP_2921 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Propiolactam (N) -4.6 -7.1 compare
nitrogen source Butyrolactam (N) -4.4 -9.3 compare
nitrogen source Butyrolactam (N) -4.4 -10.2 compare
nitrogen source Propiolactam (N) -3.7 -7.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -3.5 compare
phage P. put PUT 10 MOI 0.1 -0.8 -3.0 compare
carbon source Valerolactone (C) -0.7 -1.9 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.6 -2.1 compare
phage P. putida South MOI 10 -0.6 -1.4 compare
phage P. put South MOI 1 -0.6 -2.7 compare
carbon source L-Phenylalanine 5 mM (C) -0.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.8 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.5 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.6 +2.1 compare
no stress control Growth with no stress +0.7 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.1 compare