Fitness data for PP_2907 in Pseudomonas putida KT2440

DNA-binding response regulator
SEED: DNA-binding response regulator
KEGG: two-component system, OmpR family, response regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.2 -3.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.9 -3.9 compare
phage P. putida PUT 7 MOI 1 -2.1 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.0 -3.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.7 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.6 -2.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -2.1 compare
stress NaCl stress 250 mM -1.3 -2.1 compare
phage P. putida Sci small MOI 0.1 -1.3 -1.3 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.2 -0.9 compare
carbon source L-Phenylalanine 5 mM (C) -1.2 -2.9 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +1.2 +2.0 compare
pH Growth at pH6 and (C) D-Glucose +1.3 +2.0 compare
pH Growth at pH7 and (C) D-Glucose +1.3 +2.8 compare
pH Growth at pH7 and (C) D-Glucose +1.3 +2.2 compare
carbon source D-Glucose (C) +1.3 +3.2 compare
temperature Growth at 25C +1.4 +3.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +2.3 compare
carbon source D-Glucose (C) +2.0 +5.5 compare