Fitness data for PP_2890 in Pseudomonas putida KT2440

exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI
SEED: Exodeoxyribonuclease III (EC 3.1.11.2)
KEGG: exodeoxyribonuclease III

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source Propandiamine (N) -1.9 -3.3 compare
phage P. putida Sci small MOI 0.1 -1.4 -1.8 compare
phage P. putida Sci small MOI 0.1 -1.2 -1.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -1.1 -2.8 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -1.0 -2.4 compare
carbon source 3-methyl-1-butanol (C) -0.9 -3.4 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.8 -2.7 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.8 -2.6 compare
pH pH 4 -0.7 -2.2 compare
stress R2A with Fusaric 240 ug/mL -0.7 -1.1 compare
carbon source ferulate (C); with MOPS -0.7 -1.3 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.7 -1.8 compare
carbon source 3-methyl-1-butanol (C) -0.7 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -2.4 compare
phage P. putida South MOI 10 -0.7 -2.5 compare
carbon source D-Glucose (C) +0.7 +2.2 compare
phage PUT 8 MOI 1 +0.7 +2.0 compare
nitrogen source Ammonium chloride (N) +0.7 +2.0 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +1.3 compare
nitrogen source NAG (N); with MOPS +0.8 +2.0 compare