Fitness data for PP_2886 in Pseudomonas putida KT2440

putative Cytochrome b561
SEED: Cytochrome B561, bacterial precursor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.1 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.6 -1.8 compare
stress R2A with Fusaric 480 ug/mL -0.6 -2.9 compare
nitrogen source Urea (N) -0.6 -2.1 compare
stress Growth with Chloride 500 mM; with MOPS -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -3.0 compare
nitrogen source no extra (N); with MOPS -0.5 -1.8 compare
stress R2A with Fusaric 120 ug/mL -0.5 -2.4 compare
stress Growth with Chloride 500 mM; with MOPS -0.5 -2.2 compare
micoeukaryotes C.elegans, mixed culture-2 -0.5 -2.3 compare
stress Growth with Chloride 200 mM; with MOPS -0.5 -1.5 compare
temperature shift Temperature shift 10_to_30 -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.9 compare
pH Growth at pH8 and (C) D-Glucose +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.8 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.5 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.8 compare