Fitness data for PP_2848 in Pseudomonas putida KT2440

urease accessory protein
SEED: Urease accessory protein UreF
KEGG: urease accessory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -1.9 -3.0 compare
pH Valerolactone (C) pH 6.5 -1.8 -3.0 compare
pH Valerolactone (C) pH 6.5 -1.7 -2.2 compare
nitrogen source D-2-Aminobutyric (N) -1.6 -2.2 compare
pH pH 8 -1.5 -2.7 compare
phage P. putida Missley MOI 0.1 -1.5 -1.3 compare
nitrogen source no extra (N); with MOPS -1.4 -1.6 compare
temperature Growth at 25C -1.4 -1.7 compare
pH D-Glucose (C) pH 6 -1.3 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2 -1.8 compare
phage PUT8 MOI 0.1 -1.2 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -2.4 compare
nitrogen source Propiolactam (N) -1.2 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.2 -2.5 compare
temperature shift Temperature shift 30_to_21 -1.1 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +1.6 compare
phage P. putida Sci Big MOI 0.1 +1.2 +2.8 compare
no phage control Time6-nophage +1.3 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.8 +1.7 compare