Fitness data for PP_2842 in Pseudomonas putida KT2440

urease accessory protein
SEED: Urease accessory protein UreD
KEGG: urease accessory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -1.8 -2.3 compare
phage P. putida PUT 7 MOI 1 -1.6 -2.5 compare
nitrogen source nitrate (N) -1.0 -3.3 compare
phage P. putida Sci small MOI 0.1 -0.9 -1.2 compare
carbon source ferulate (C); with MOPS -0.9 -2.2 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -0.8 -3.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -1.6 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -1.9 compare
carbon source L-Phenylalanine 5 mM (C) -0.7 -2.8 compare
stress Growth with Chloride 500 mM; with MOPS -0.7 -2.0 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.6 -1.4 compare
stress 3-methyl-3-butenol (pure) 0.25 vol% +0.6 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.8 +1.2 compare
phage P. putida Sci small MOI 0.1 +0.8 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.8 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +4.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +3.3 compare