Fitness data for PP_2824 in Pseudomonas putida KT2440

Transcriptional regulator, TetR family
SEED: transcriptional regulator, TetR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.3 -1.9 compare
carbon source ferulate (C); with MOPS -1.3 -2.8 compare
phage P. put PUT 10 MOI 0.1 -1.0 -3.6 compare
phage P. putida South MOI 10 -1.0 -1.7 compare
nitrogen source D-2-Aminobutyric (N) -0.9 -1.8 compare
nitrogen source no extra (N); with MOPS -0.9 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.8 -2.5 compare
nitrogen source nitrate (N) -0.8 -1.7 compare
carbon source L-Proline (C) -0.8 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8 -2.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.8 -1.8 compare
carbon source 3-Hydroxydecanoic (C) -0.8 -1.9 compare
nitrogen source Urea (N) +0.8 +2.5 compare
pH Growth at pH6 and (C) D-Glucose +0.8 +1.9 compare
carbon source carbon source Glycerol 108.6 mM +0.8 +1.7 compare
pH Growth at pH6 and (C) Trisodium citrate +1.0 +2.4 compare
nitrogen source NAG (N); with MOPS +1.2 +2.0 compare