Fitness data for PP_2815 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Trx

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -2.3 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.5 -3.3 compare
nitrogen source NAG (N); with MOPS -1.0 -1.9 compare
nitrogen source Urea (N); with MOPS -0.8 -2.2 compare
carbon source ferulate (C); with MOPS -0.8 -1.5 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.8 -2.5 compare
carbon source carbon source D-Glucose 55.5 mM -0.8 -1.8 compare
pH Growth at pH8 and (C) Trisodium citrate -0.7 -1.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.7 -2.3 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -3.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -3.3 compare
no stress control Growth with no stress -0.7 -2.4 compare
carbon source carbon source Bisabolene 48.9 mM -0.7 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.7 -1.6 compare
pH Growth at pH8 and (C) D-Glucose -0.7 -2.0 compare
nitrogen source nitrogen source nitrite 0.5mM +0.7 +1.7 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.9 +2.6 compare