Fitness data for PP_2803 in Pseudomonas putida KT2440

1,3-propanediol dehydrogenase
SEED: Alcohol dehydrogenase (EC 1.1.1.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -1.0 -1.8 compare
phage P. putida Missley MOI 0.1 -0.7 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -1.6 compare
carbon source Trisodium citrate (C) -0.7 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.8 compare
nitrogen source nitrate (N) -0.6 -1.1 compare
carbon source ferulate (C); with MOPS -0.6 -1.0 compare
carbon source Beta-alanine (C) -0.6 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.4 compare
nitrogen source nitrogen source nitrite 0.5mM +0.6 +1.3 compare
temperature shift Temperature shift 10_to_21; with MOPS +0.6 +2.2 compare
carbon source Octanoic (C) +0.6 +2.3 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys +0.6 +2.8 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +0.6 compare
pH pH 8 +0.7 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.7 +1.6 compare
carbon source carbon source D-Glucose 55.5 mM +0.7 +2.0 compare