Fitness data for PP_2802 in Pseudomonas putida KT2440

Amino acid permease family protein
SEED: amino acid permease family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -3.5 compare
carbon source Valerolactone (C) -0.9 -2.2 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.7 -2.1 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.0 compare
phage P. putida Sci Big MOI 0.1 -0.7 -1.3 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.7 -1.9 compare
nitrogen source nitrate (N) -0.7 -2.0 compare
temperature shift Temperature shift 30_to_25 -0.6 -1.4 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.6 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -1.4 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.6 -1.2 compare
carbon source D-Glucose (C); with MOPS -0.5 -1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.2 compare
stress Geraniol 1 vol% +0.5 +2.3 compare
stress Growth with Chloride 500 mM +0.6 +3.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.6 +1.6 compare
carbon source Tween 20 (C) +0.6 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.2 compare
carbon source butyrate (C) +0.6 +2.4 compare