Fitness data for PP_2774 in Pseudomonas putida KT2440

glycine betaine ABC transporter, ATPase/permease fusion protein
SEED: L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.6 -2.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.9 compare
phage P. put PUT 10 MOI 10 -0.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.1 compare
carbon source Vanillin (C) -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.0 compare
temperature shift Temperature shift 30_to_25 -0.4 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.2 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4 +1.7 compare
r2a control R2A control +0.5 +1.9 compare
phage P. put PUT 10 MOI 1 +0.5 +3.2 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.2 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.7 +2.3 compare
pH pH 6 +0.7 +2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.6 compare