Fitness data for PP_2759 in Pseudomonas putida KT2440

ribose ABC transporter - ATP-binding subunit
SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
KEGG: simple sugar transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -2.0 -1.8 compare
carbon source Valerolactone (C) -1.8 -2.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.8 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -1.5 -2.0 compare
carbon source acetate (C) -1.5 -1.6 compare
carbon source ferulate (C); with MOPS -1.5 -2.0 compare
nitrogen source Propandiamine (N) -1.4 -1.6 compare
temperature Growth at 25C -1.4 -2.0 compare
nitrogen source Urea (N); with MOPS -1.4 -1.5 compare
pH Growth at pH7 and (C) Trisodium citrate -1.3 -0.9 compare
phage P. putida Missley MOI 0.1 -1.3 -1.0 compare
pH Growth at pH8 and (C) D-Glucose -1.1 -1.3 compare
carbon source D-Glucose (C) -1.1 -1.4 compare
nitrogen source nitrogen source nitrite 1mM -1.0 -1.4 compare
phage P. putida Sci small MOI 0.1 -0.9 -0.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.9 +2.4 compare
pH Growth at pH6 and (C) Trisodium citrate +0.9 +1.6 compare
carbon source 3-Hydroxydecanoic (C) +1.0 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.5 +1.3 compare