Fitness data for PP_2755 in Pseudomonas putida KT2440

sulfur acquisition oxidoreductase, SfnB family
SEED: Acyl-CoA dehydrogenase family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -3.0 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.6 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.7 compare
phage P. putida Missley MOI 0.1 -0.6 -1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -3.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.7 compare
carbon source D-Lysine 10 mM (C) -0.5 -2.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.5 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.8 compare
stress R2A with Fusaric 120 ug/mL -0.4 -2.5 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.2 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.4 compare
carbon source Nonanoic (C) +0.5 +2.6 compare
carbon source Valerolactone (C) +0.5 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.5 +1.7 compare
nitrogen source nitrate (N) +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.9 compare