Fitness data for PP_2754 in Pseudomonas putida KT2440

putative OprD family outer membrane porin
SEED: Outer membrane porin, OprD family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH Growth at pH8 and (C) D-Glucose -0.7 -2.2 compare
nitrogen source no extra (N); with MOPS -0.6 -2.4 compare
carbon source 3-Hydroxydecanoic (C) -0.5 -2.4 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.5 -2.4 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.6 compare
no stress control Growth with no stress -0.4 -1.8 compare
carbon source L-Lysine (C) -0.4 -1.8 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.4 -1.9 compare
carbon source Lignin Monomers (C) -0.4 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.9 compare
carbon source ferulate (C); with MOPS +0.4 +1.8 compare
carbon source Trisodium citrate (C) +0.4 +1.8 compare
carbon source Nonanoic (C) +0.4 +1.9 compare
nitrogen source Urea (N) +0.4 +1.8 compare
carbon source Levulinic Acid (C) +0.4 +2.5 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.4 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +2.6 compare