Fitness data for PP_2751 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
temperature shift Temperature shift 30_to_25 -1.0 -3.6 compare
phage P. putida PUT 7 MOI 1 -0.8 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.8 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.7 -2.9 compare
nitrogen source Caprolactam (N) -0.5 -2.4 compare
carbon source Valerolactone (C) -0.5 -2.2 compare
nitrogen source Propandiamine (N) -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.6 compare
pH Growth at pH8 and (C) Trisodium citrate +0.5 +2.3 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.5 +2.1 compare
carbon source Lignin Monomers (C) +0.5 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.5 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.3 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +0.5 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5 +1.6 compare
carbon source ferulate (C); with MOPS +0.7 +2.8 compare