Fitness data for PP_2713 in Pseudomonas putida KT2440

DNA-binding response regulator
SEED: Two-component system response regulator QseB
KEGG: two-component system, OmpR family, response regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -3.3 -4.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -4.3 compare
carbon source ferulate (C); with MOPS -1.1 -2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -4.2 compare
carbon source ferulate (C); with MOPS -1.0 -3.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.9 -2.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.7 compare
pH D-Glucose (C) pH 6 -0.8 -1.8 compare
stress Growth with Chloride 200 mM; with MOPS -0.8 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -3.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.7 -2.1 compare
carbon source ferulate (C); with MOPS -0.7 -1.8 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.8 compare
stress MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL -0.7 -3.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.0 compare
stress Growth with Chloride 500 mM; with MOPS -0.6 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -2.8 compare
temperature shift Temperature shift 10_to_21; with MOPS -0.6 -2.2 compare
carbon source Vanillin (C) +0.6 +3.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.9 +2.2 compare