Fitness data for PP_2710 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: long-chain acyl-CoA synthetase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -3.5 -5.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -3.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -4.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -4.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -4.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -3.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.8 -2.0 compare
carbon source Ferulic Acid (C) -0.7 -3.7 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -2.5 compare
pH D-Glucose (C) pH 6 -0.7 -2.4 compare
stress R2A with Fusaric 480 ug/mL -0.7 -2.7 compare
stress Growth with Chloride 200 mM; with MOPS -0.7 -1.9 compare
carbon source ferulate (C); with MOPS -0.7 -1.9 compare
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.7 -3.8 compare
stress Growth with Chloride 500 mM; with MOPS -0.7 -2.2 compare
carbon source 2-Methylbutanoic (C) -0.6 -2.9 compare
stress R2A with Fusaric 120 ug/mL -0.6 -2.6 compare
pH D-Glucose (C) pH 6 -0.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +1.7 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.7 +3.2 compare