Fitness data for PP_2708 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Thermostable hemolysin delta-VPH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.6 -3.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -5.0 compare
pH D-Glucose (C) pH 6 -1.0 -4.9 compare
phage P. putida Sci small MOI 0.1 -0.8 -1.9 compare
pH D-Glucose (C) pH 6 -0.8 -3.3 compare
carbon source D-Glucose (C) -0.8 -2.6 compare
carbon source Ferulic Acid (C) -0.7 -4.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.6 compare
carbon source ferulate (C); with MOPS -0.5 -1.5 compare
carbon source ferulate (C); with MOPS -0.5 -1.7 compare
carbon source ferulate (C); with MOPS -0.5 -1.6 compare
pH D-Glucose (C) pH 6.5 -0.4 -2.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4 +1.7 compare
carbon source Valerolactone (C) +0.5 +2.1 compare
phage P. putida South MOI 10 +0.5 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.4 compare