Fitness data for PP_2696 in Pseudomonas putida KT2440

DNA-binding transcriptional regulator, homocysteine-binding
SEED: Transcriptional activator MetR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.6 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.6 -2.7 compare
nitrogen source nitrite (N) -0.5 -2.0 compare
temperature Growth at 30C; with MOPS -0.5 -1.9 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.5 -2.3 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.6 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.4 -2.4 compare
carbon source Trisodium citrate (C) -0.4 -1.2 compare
carbon source Crotonic (C) -0.4 -1.8 compare
nitrogen source Urea (N); with MOPS -0.4 -1.3 compare
nitrogen source nitrogen source nitrite 0.5mM -0.4 -1.4 compare
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM +0.4 +2.3 compare
carbon source Tween 20 (C) +0.4 +1.4 compare
carbon source Nonanoic (C) +0.4 +2.4 compare
nitrogen source NAG (N); with MOPS +0.4 +1.3 compare
carbon source Oleic (C) +0.4 +2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.2 compare
toxin pUC18_phdP1_pSU18T_docP1 +0.5 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +2.2 compare