Fitness data for PP_2652 in Pseudomonas putida KT2440

putative Hydratase/decarboxylase
SEED: 2-keto-4-pentenoate hydratase (EC 4.2.1.80)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH pH 6 -0.9 -2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.9 -3.5 compare
pH pH 4 -0.9 -3.6 compare
pH pH 8 -0.8 -2.9 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.8 -2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.7 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -2.9 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.7 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.9 compare
carbon source carbon source Glycerol 108.6 mM -0.6 -2.9 compare
carbon source carbon source Bisabolol 45 mM -0.6 -2.7 compare
pH pH 9 -0.6 -1.6 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.6 -3.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.6 +1.9 compare
carbon source D-Glucose (C) +0.6 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.7 +2.9 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +2.2 compare
phage P. putida Sci small MOI 0.1 +0.7 +2.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.1 compare