Fitness data for PP_2639 in Pseudomonas putida KT2440

4-hydroxy-tetrahydrodipicolinate synthase
SEED: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
KEGG: dihydrodipicolinate synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.5 -2.3 compare
nitrogen source Propiolactam (N) -0.5 -2.6 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.0 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.4 compare
carbon source Nonanoic (C) -0.4 -2.6 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.4 -1.8 compare
stress Growth with Chloride 500 mM; with MOPS -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.7 compare
carbon source 1,3-Hexanediol (C) +0.4 +2.3 compare
stress 3-methyl-3-butenol (pure) 0.25 vol% +0.4 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.0 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.4 +2.9 compare
nitrogen source Propandiamine (N) +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +2.1 compare
phage P. putida South MOI 1 +0.5 +2.5 compare
pH Valerolactone (C) pH 6.5 +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
nitrogen source Propandiamine (N) +0.7 +2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.3 compare