Fitness data for PP_2628 in Pseudomonas putida KT2440

Uncharacterized ABC transporter ATP-binding protein HI_1051
SEED: Multidrug resistance ABC transporter ATP-binding and permease protein
KEGG: ATP-binding cassette, subfamily B, bacterial

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.8 -2.7 compare
nitrogen source no extra (N); with MOPS -0.6 -3.3 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -2.4 compare
stress Formaldehyde 0.03125 vol% -0.5 -3.2 compare
carbon source Delta-Nonalactone (C) -0.5 -3.2 compare
pH D-Glucose (C) pH 6 -0.5 -2.4 compare
pH Valerolactone (C) pH 6.5 -0.5 -2.5 compare
pH Growth at pH7 and (C) D-Glucose -0.4 -2.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.8 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.5 compare
phage P. putida PUT 7 MOI 1 -0.3 -1.1 compare
phage P. putida South MOI 1 +0.4 +2.1 compare
phage P. putida South MOI 10 +0.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare