Fitness data for PP_2627 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: IcmF-related protein
KEGG: type VI secretion system protein ImpL

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source Valeric (C) -0.3 -1.9 compare
stress Growth with Chloride 500 mM; with MOPS -0.2 -1.7 compare
temperature Growth at 25C -0.2 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.2 -1.5 compare
carbon source Glucose (C) (20mM) -0.2 -1.8 compare
phage P. putida Sci small MOI 0.1 -0.2 -1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.2 -1.8 compare
carbon source Heptanoic (C) -0.2 -1.8 compare
nitrogen source NAG (N) -0.2 -1.7 compare
carbon source Acetate Carbon Source (20mM) -0.2 -1.8 compare
pH Valerolactone (C) pH 6.5 +0.2 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.2 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.2 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.5 compare
phage P. put PUT 10 MOI 0.1 +0.2 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.7 compare
pH Growth at pH8 and (C) D-Glucose +0.3 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.4 compare
nitrogen source 2,6-diaminopimelic (N) +0.3 +2.0 compare
phage P. putida Sci small MOI 0.1 +0.8 +4.4 compare