Fitness data for PP_2626 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Uncharacterized protein ImpA
KEGG: type VI secretion system protein VasJ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Ammonium chloride (N); with MOPS -0.7 -2.2 compare
carbon source Tween 20 (C) -0.6 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -2.9 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.4 compare
carbon source ferulate (C); with MOPS -0.5 -1.7 compare
carbon source carbon source D-Glucose 55.5 mM +0.5 +1.8 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare
pH pH 5 +0.5 +1.5 compare
stress Growth with Chloride 500 mM +0.5 +2.6 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.6 +2.6 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.6 +2.2 compare
nitrogen source nitrite (N) +0.6 +2.7 compare
pH Growth at pH7 and (C) Trisodium citrate +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.2 compare
phage P. putida Missley MOI 0.1 +0.8 +2.5 compare
nitrogen source NAG (N); with MOPS +0.9 +2.8 compare