Fitness data for PP_2622 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Uncharacterized protein similar to VCA0109
KEGG: type VI secretion system protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -2.8 -2.6 compare
nitrogen source Propiolactam (N) -2.7 -2.6 compare
nitrogen source NAG (N); with MOPS -2.3 -1.5 compare
pH Growth at pH7 and (C) D-Glucose -1.8 -1.3 compare
phage P. putida Sci Big MOI 0.1 -1.8 -1.6 compare
temperature shift Temperature shift 30_to_34; with MOPS -1.7 -2.2 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -1.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.5 -2.1 compare
carbon source butyrate (C) -1.5 -3.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.4 -2.0 compare
carbon source 2-Methylbutanoic (C) -1.3 -2.3 compare
temperature shift Temperature shift 30_to_10; with MOPS -1.3 -2.9 compare
pH Growth at pH9 and (C) D-Glucose -1.3 -2.1 compare
temperature Growth at 30C; with MOPS -1.2 -2.2 compare
carbon source D-Glucose (C); with MOPS -1.2 -1.3 compare
pH Growth at pH7 and (C) Trisodium citrate -1.2 -2.0 compare
phage P. putida Sci small MOI 0.1 +1.6 +2.4 compare
nitrogen source D-2-Aminobutyric (N) +1.9 +3.7 compare