Fitness data for PP_2620 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Uncharacterized protein ImpH/VasB
KEGG: type VI secretion system protein ImpH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Propandiamine (N) -0.8 -2.7 compare
nitrogen source NAG (N); with MOPS -0.8 -2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -1.7 compare
nitrogen source NAG (N); with MOPS -0.7 -1.6 compare
carbon source Valerolactone (C) -0.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -2.6 compare
temperature Growth at 25C -0.5 -1.6 compare
carbon source ferulate (C); with MOPS -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.4 compare
pH Growth at pH9 and (C) D-Glucose -0.5 -2.7 compare
carbon source L-Lysine (C) -0.5 -2.2 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.7 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.9 compare
carbon source butyrate (C) +0.5 +2.1 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.6 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.8 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.6 +1.9 compare