Fitness data for PP_2616 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
KEGG: type VI secretion system protein ImpK

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source Tween 20 (C) -1.6 -2.3 compare
temperature Growth at 30C; with MOPS -1.5 -1.2 compare
nitrogen source Ammonium chloride (N) -1.4 -1.9 compare
nitrogen source no extra (N); with MOPS -1.2 -2.2 compare
carbon source L-Leucine (C) -1.2 -1.8 compare
pH Growth at pH6 and (C) Trisodium citrate -1.1 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -1.0 -3.1 compare
nitrogen source nitrogen source nitrate 5mM -1.0 -2.1 compare
nitrogen source Propiolactam (N) -1.0 -2.7 compare
nitrogen source Caprolactam (N) -1.0 -2.1 compare
carbon source Lauric (C) -0.9 -1.3 compare
nitrogen source Propandiamine (N) -0.9 -1.3 compare
carbon source Myristic (C) +0.9 +2.2 compare
pH Growth at pH7 and (C) D-Glucose +0.9 +1.5 compare
temperature Growth at 25C +0.9 +2.0 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +3.1 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +1.0 +2.9 compare
nitrogen source nitrate (N) +1.1 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +3.0 +1.8 compare